Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs61859016 | chr10:81852500 | C/A | 0.000141 | 488 | 15.97 | 16.07 | 9.77 | KM Plot |
| THCA | rs61859022 | chr10:81860799 | G/A | 0.000142 | 487 | 16.08 | 15.9 | 9.77 | KM Plot |
| THCA | rs61859762 | chr10:81664598 | C/A | 0 | 485 | 15.97 | 16.65 | 5.92 | KM Plot |
| THCA | rs61859763 | chr10:81671615 | A/T | 0 | 482 | 15.9 | 16.07 | 5.92 | KM Plot |
| THCA | rs61859766 | chr10:81683040 | G/A | 2.68E-5 | 486 | 16.08 | 16.07 | 6.03 | KM Plot |
| THCA | rs61860016 | chr10:81915889 | G/C | 0.00013 | 483 | 15.97 | 16.57 | 9.77 | KM Plot |
| THCA | rs61860034 | chr10:81931848 | C/T | 0.000115 | 487 | 15.9 | 16.65 | 9.77 | KM Plot |
| THCA | rs61860039 | chr10:81939906 | G/A | 0.000114 | 488 | 15.93 | 16.65 | 9.77 | KM Plot |
| THCA | rs61860041 | chr10:81944331 | G/A | 0.000114 | 488 | 15.93 | 16.65 | 9.77 | KM Plot |
| THCA | rs61860042 | chr10:81946238 | G/A | 0.000114 | 488 | 15.93 | 16.65 | 9.77 | KM Plot |
| THCA | rs61860043 | chr10:81946398 | G/A | 0.000114 | 488 | 15.93 | 16.65 | 9.77 | KM Plot |
| THCA | rs61860044 | chr10:81946538 | C/G | 0.000114 | 488 | 15.93 | 16.65 | 9.77 | KM Plot |
| THCA | rs61860051 | chr10:81957596 | C/T | 0.000114 | 487 | 15.93 | 15.9 | 9.77 | KM Plot |
| THCA | rs61860399 | chr10:81720665 | C/T | 0.000229 | 488 | 15.93 | 15.9 | 13.5 | KM Plot |
| THCA | rs61860400 | chr10:81723427 | T/C | 0.000198 | 490 | 15.93 | 15.9 | 13.5 | KM Plot |